DeviceAgent

DeviceAgent: An autonomous multimodal AI agent for flexible bioelectronics

Jaeyong Lee*, Zuwan Lin*, Wenbo Wang*, Jongmin Baek*, Ariel J. Lee, Almir Aljović, Arnau Marin-Llobet, Xinhe Zhang, Ren Liu, Na Li, Jia Liu#

bioRxiv, 2025 ·
Spike sorting AI agent

Spike sorting AI agent

Zuwan Lin*, Arnau Marin-Llobet*, Jongmin Baek*, Alessio P. Buccino, Almir Aljović, Yichun He, Jaeyong Lee, Wenbo Wang, Xinhe Zhang, Ariel J. Lee, Ningyue Liang, D. Xu, Jin Du, Jie Ding, Edward F. Chang, Na Li, Jia Liu#

Spatial transcriptomics AI agent

Spatial transcriptomics AI agent charts hPSC-pancreas maturation in vivo

Wenbo Wang*, Zuwan Lin*, Arnau Marin-Llobet, Qiang Li, Samuel D. Pollock, Xin Sui, Almir Aljović, Jaeyong Lee, Jongmin Baek, Ningyue Liang, Xinhe Zhang, Connie Kangni Wang, Jiahao Huang, Mai Liu, Zihan Gao, Hao Sheng, Jin Du, Stephen J. Lee, Brandon Wang, Yichun He, Jie Ding, Xiao Wang, Juan R. Alvarez-Dominguez#, Jia Liu#

Behavior analysis agent

An autonomous AI agent for universal behavior analysis

Almir Aljović*#, Zuwan Lin*#, Wenbo Wang, Xinhe Zhang, Arnau Marin-Llobet, Ningyue Liang, Bradley Canales, Jaeyong Lee, Jongmin Baek, Ren Liu, Catherine Li, Na Li, Jia Liu#

bioRxiv, 2025 ·

In situ electro-sequencing

Multimodal charting of molecular and functional cell states via in situ electro-sequencing

Qiang Li*, Zuwan Lin*, Ren Liu*, Xin Tang*, Jiahao Huang, Yichun He, Xin Sui, Weiwen Tian, Haowen Zhou, Hao Sheng, Hailing Shi, Ling Xiao, Xiao Wang#, Jia Liu#

Cell, 2023 ·
Brain electrode interface map

In situ charting of single-cell transcriptional change at the brain and flexible electrode interface

Zuwan Lin*, Wenbo Wang*, Jaeyong Lee*, Siyuan Zhao*, Connie Kangni Wang, Jiahao Huang, Emma Hsiao, Hao Sheng, Xin Sui, Hu Zeng, Xiao Wang, Jia Liu#

In situ graphene-seq

In situ graphene-seq: spatial transcriptomics and chronic electrophysiological characterization of tissue microenvironments

Jaeyong Lee*, Wenbo Wang*, Qiang Li, Zuwan Lin, Ren Liu, Zefang Tang, Junya Aoyama, Richard T. Lee, Xiao Wang, Jia Liu#

Nature Communications, 2026
Cardiac microtissue electronics

Tissue-embedded stretchable nanoelectronics reveal electrical maturation of human 3D cardiac microtissues

Zuwan Lin*, Jessica C. Garbern*, Ren Liu*, Qiang Li, Estela Mancheño Juncosa, Hannah LT. Elwell, Morgan Sokol, Junya Aoyama, Undine-Sophie Deumer, Emma Hsiao, Hao Sheng, Richard T. Lee#, Jia Liu#

Science Advances, 2023

Tissue-soft brain electronics

Brain implantation of tissue-level-soft bioelectronics via embryonic development

Hao Sheng*, Ren Liu*, Qiang Li*, Zuwan Lin*, Yichun He, Thomas S. Blum, Hao Zhao, Xin Tang, Wenbo Wang, Lishuai Jin, Zheliang Wang, Emma Hsiao, Paul Le Floch, Hao Shen, Ariel J. Lee, Rachael Alice Jonas-Closs, James Briggs, Siyi Liu, Daniel Solomon, Xiao Wang, Nanshu Lu, Jia Liu#

Nature, 2025 ·
Human islet flexible electronics

Implanted flexible electronics reveal principles of human islet cell electrical maturation

Qiang Li*, Ren Liu*, Zuwan Lin*, Xinhe Zhang*, Wenbo Wang*, Israeli Galicia Silva, Mai Liu, Zihan Gao, Samuel D. Pollock, Juan R. Alvarez-Dominguez#, Jia Liu#

Science, 2026
Cyborg organoid protocol

Cyborg organoids integrated with stretchable nanoelectronics can be functionally mapped during development

Zuwan Lin*, Wenbo Wang*, Ren Liu*, Qiang Li*, Jaeyong Lee, Charles Hirschler, Jia Liu#

Nature Protocols, 2025
Lifetime neural tracking

Tracking neural activity from the same cells during the entire adult life of mice

Siyuan Zhao*, Xin Tang*, Weiwen Tian*, Sebastian Partarrieu*, Ren Liu, Hao Shen, Jaeyong Lee, Shiqi Guo, Zuwan Lin, Jia Liu#

Nature Neuroscience, 2023

Mouse CNS spatial atlas

Spatial atlas of the mouse central nervous system at molecular resolution

Hailing Shi*, Yichun He*, Yiming Zhou*, Jiahao Huang, Kamal Maher, Brandon Wang, Zefang Tang, Shuchen Luo, Peng Tan, Morgan Wu, Zuwan Lin, Jingyi Ren, Yaman Thapa, Xin Tang, Ken Y. Chan, Benjamin E. Deverman, Hao Shen, Albert Liu, Jia Liu#, Xiao Wang#

Nature, 2023
ClusterMap

ClusterMap for multi-scale clustering analysis of spatial gene expression

Yichun He*, Xin Tang*, Jiahao Huang, Jingyi Ren, Haowen Zhou, Kevin Chen, Albert Liu, Hailing Shi, Zuwan Lin, Qiang Li, Abhishek Aditham, Johain Ounadjela, Emanuelle I. Grody, Jian Shu, Jia Liu#, Xiao Wang#

Nature Communications, 2021
RNA kinetics

Spatiotemporally resolved transcriptomics reveals the subcellular RNA kinetic landscape

Jingyi Ren*, Haowen Zhou*, Hu Zeng*, Connie Kangni Wang, Jiahao Huang, Xiaojie Qiu, Xin Sui, Qiang Li, Xunwei Wu, Zuwan Lin, Jennifer A. Lo, Kamal Maher, Yichun He, Xin Tang, Judson Lam, Hongyu Chen, Brian Li, David E. Fisher, Jia Liu, Xiao Wang#

Nature Methods, 2023
3D spatial transcriptomics

Scalable spatial single-cell transcriptomics and translatomics in 3D thick tissue blocks

Xin Sui*, Jennifer A. Lo*, Shuchen Luo, Yichun He, Zefang Tang, Zuwan Lin, Yiming Zhou, Wendy Xueyi Wang, Jia Liu, Xiao Wang#

Nature Methods, 2025